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  1. Knowledge Discovery in Life Science Literature
    International Workshop, KDLL 2006, Singapore, April 9, 2006, Proceedings
    Author: Bremer, Eric G
    Published: 2006
    Publisher:  Springer-Verlag GmbH., Berlin Heidelberg

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    Source: Union catalogues
    Media type: Ebook
    Format: Online
    ISBN: 9783540328100
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    Series: Lecture Notes in Computer Science ; 3886
    Subjects: Artificial intelligence; Bioinformatics; Computer science; Database management; Information storage and retrieval systems
  2. Acoustic sensors for biomedical applications
    Author: Dey, Nilanjan; Ashour, Amira; Mohamed, Waleed S; Nguyen, Nhu Gia
    Published: [2019]; © 2019
    Publisher:  Springer, Cham

    In this book, application-related studies for acoustic biomedical sensors are covered in depth. The book features an array of different biomedical signals, including acoustic biomedical signals as well as the thermal biomedical signals, magnetic... more

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    Hochschulbibliothek der Fachhochschule Aachen
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    In this book, application-related studies for acoustic biomedical sensors are covered in depth. The book features an array of different biomedical signals, including acoustic biomedical signals as well as the thermal biomedical signals, magnetic biomedical signals, and optical biomedical signals to support healthcare. It employs signal processing approaches, such as filtering, Fourier transform, spectral estimation, and wavelet transform. The book presents applications of acoustic biomedical sensors and bio-signal processing for prediction, detection, and monitoring of some diseases from the phonocardiogram (PCG) signal analysis. Several challenges and future perspectives related to the acoustic sensors applications are highlighted. This book supports the engineers, researchers, designers, and physicians in several interdisciplinary domains that support healthcare

     
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  3. The Art of Theoretical Biology /
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020].; ©2020.
    Publisher:  Springer International Publishing,, Cham :

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    Freie Universität Berlin, Universitätsbibliothek, Zentralbibliothek
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    Source: Philologische Bibliothek, FU Berlin
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 978-3-030-33471-0
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    RVK Categories: WB 4185 ; WD 9000
    Subjects: Systems Biology; Visualization; Fine Arts; Computational Biology/Bioinformatics; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Theoretische Biologie; Bildwissenschaft; Visualisierung; Schönheit
    Scope: 1 Online-Ressource (X, 152 Seiten) :, Illustrationen.
  4. Grammars for Language and Genes
    Theoretical and Empirical Investigations
    Author: Chiang, David
    Published: 2012
    Publisher:  Springer-Verlag Berlin Heidelberg, Berlin, Heidelberg

    Grammars are gaining importance in natural language processing and computational biology as a means of encoding theories and structuring algorithms. But one serious obstacle to applications of grammars is that formal language theory traditionally... more

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    Max-Planck-Institut für ethnologische Forschung, Bibliothek
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    Grammars are gaining importance in natural language processing and computational biology as a means of encoding theories and structuring algorithms. But one serious obstacle to applications of grammars is that formal language theory traditionally classifies grammars according to their weak generative capacity (what sets of strings they generate) and tends to ignore strong generative capacity (what sets of structural descriptions they generate) even though the latter is more relevant to applications. This book develops and demonstrates a framework for carrying out rigorous comparisons of gramma

     
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    Volltext (lizenzpflichtig)
    Source: Union catalogues
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 1283449471; 9783642204449; 9781283449472
    Other identifier:
    Series: Theory and Applications of Natural Language Processing
    Subjects: Computer science; Translators (Computer programs); Bioinformatics
    Scope: Online-Ressource, v.: digital
    Notes:

    Includes bibliographical references and index

    Electronic reproduction; Available via World Wide Web

    Grammars for Language and Genes; Foreword; Acknowledgements; Contents; Chapter 1 Introduction; 1.1 The Problem of Strong Generative Capacity; 1.2 Wine, King,Woman, and Truth; 1.3 The Case of Dutch Cross-Serial Dependencies; 1.4 Overview; Theoretical framework; Statistical parsing; Machine translation; Biological sequence analysis; Chapter 2 Foundation; 2.1 Strong Generative Capacity, Relativized; 2.2 Simple Literal Movement Grammars; 2.3 Interpretation Functions; 2.4 Summary; 2.5 Additional Topics; 2.5.1 Tree-Adjoining Grammars; No adjunction: tree substitution grammars

    No wrapping adjunction: tree-insertion grammarsLimited spine adjunction: regular form; Multiple adjunction and sister adjunction; 2.5.2 Multicomponent Grammars; 2.5.3 Parsing; 2.5.4 Cover Grammars; Chapter 3 Statistical Parsing; 3.1 Measuring Statistical Modeling Power; 3.2 Lexicalized Probabilistic CFG; 3.3 A Probabilistic TIG Model; Basic definition; Independence assumptions and smoothing; Parsing; 3.4 Training from Partial Structural Descriptions; 3.4.1 Rule-Based Reconstruction; 3.4.2 Training by Expectation-Maximization; 3.5 Related Work; 3.6 Summary; Chapter 4 Machine Translation

    4.1 Measuring Translation Power4.2 Translation and Bitext Parsing; 4.3 Synchronous CFG; 4.3.1 Applications to Translation; Inversion transduction grammar; Yamada-Knight syntax-based model; Hiero; 4.3.2 Extensions Synchronous TSG; Synchronous tree sequence substitution grammar; Synchronous TIG; 4.4 Synchronous TAG; 4.4.1 Synchronous Regular Form TAG; 4.4.2 Extensions; Bounded nonisomorphisms: TAG.TSG; A more substantial extension: TAG.RF-TAG; 4.5 Summary; Chapter 5 Biological Sequence Analysis: Basics; 5.1 Background; 5.1.1 Sequences; 5.1.2 Structures; 5.2 Measuring Sequence Analysis Power

    5.3 Linked Grammars for Sequence Analysis5.3.1 Squeezing DGC; Alpha-helices; Limited RNA tertiary interactions; 5.3.2 Beyond CFG; Pseudoknots; Beta-sheets; 5.4 Computing Probabilities and Partition Functions; Calculating energies; Counting conformations; Computing partial sums of the partition function; Implementation details; 5.5 Summary; Chapter 6 Biological Sequence Analysis: Intersection; 6.1 Intersecting CFLs and CFLs: a Critique; 6.2 Intersecting CFGs and Finite-State Automata; 6.2.1 Integrating the Zimm-Bragg Model and the HP Model; 6.2.2 Intersecting the Grammars

    6.2.3 Computing the Partition Function6.2.4 Evaluation Against Exact Enumeration; 6.3 Intersection in Nonlinear sLMGs; 6.4 Summary; Chapter 7 Conclusion; Statistical parsing; Machine translation; Biological sequence analysis; Conclusion; References; Index;
  5. Knowledge Discovery in Life Science Literature
    International Workshop, KDLL 2006, Singapore, April 9, 2006, Proceedings
    Author: Bremer, Eric G.
    Published: 2006
    Publisher:  Springer-Verlag GmbH., Berlin Heidelberg

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    Source: Union catalogues
    Language: Undetermined
    Media type: Ebook
    Format: Online
    ISBN: 9783540328100
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    Series: Lecture Notes in Computer Science ; 3886
    Subjects: Artificial intelligence; Bioinformatics; Computer science; Database management; Information storage and retrieval systems; Wissenschaftliche Literatur; Biowissenschaften; Wissensextraktion
  6. Acoustic sensors for biomedical applications
    Author: Dey, Nilanjan; Ashour, Amira; Mohamed, Waleed S.; Nguyen, Nhu Gia
    Published: [2019]; © 2019
    Publisher:  Springer, Cham

    In this book, application-related studies for acoustic biomedical sensors are covered in depth. The book features an array of different biomedical signals, including acoustic biomedical signals as well as the thermal biomedical signals, magnetic... more

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    Hochschulbibliothek der Fachhochschule Aachen
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    61 VUT 28
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    In this book, application-related studies for acoustic biomedical sensors are covered in depth. The book features an array of different biomedical signals, including acoustic biomedical signals as well as the thermal biomedical signals, magnetic biomedical signals, and optical biomedical signals to support healthcare. It employs signal processing approaches, such as filtering, Fourier transform, spectral estimation, and wavelet transform. The book presents applications of acoustic biomedical sensors and bio-signal processing for prediction, detection, and monitoring of some diseases from the phonocardiogram (PCG) signal analysis. Several challenges and future perspectives related to the acoustic sensors applications are highlighted. This book supports the engineers, researchers, designers, and physicians in several interdisciplinary domains that support healthcare.

     
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  7. The Art of Theoretical Biology
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020]; ©2020
    Publisher:  Springer International Publishing, Cham

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    Hochschule Weihenstephan-Triesdorf, Zentralbibliothek
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    Source: Union catalogues
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9783030334710
    Other identifier:
    RVK Categories: WB 4185 ; WD 9000
    Subjects: Systems Biology; Visualization; Fine Arts; Computational Biology/Bioinformatics; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Theoretische Biologie; Visualisierung; Schönheit; Bildwissenschaft
    Scope: 1 Online-Ressource (X, 152 Seiten), Illustrationen
  8. The Art of Theoretical Biology
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020]
    Publisher:  Springer, Cham

    This beautifully crafted book collects images, which were created during the process of research in all fields of theoretical biology. Data analysis, numerical treatment of a model, or simulation results yield stunning images, which represent pieces... more

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    Universitätsbibliothek Bayreuth
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    This beautifully crafted book collects images, which were created during the process of research in all fields of theoretical biology. Data analysis, numerical treatment of a model, or simulation results yield stunning images, which represent pieces of art just by themselves. The approach of the book is to present for each piece of visualization a lucid synopsis of the scientific background as well as an outline of the artistic vision

     
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    Source: Union catalogues
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Book
    ISBN: 9783030334703
    RVK Categories: WB 4185 ; WD 9000
    Subjects: bicssc; bicssc; bicssc; bisacsh; bisacsh; bisacsh; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Life sciences; Theoretische Biologie; Visualisierung; Schönheit; Bildwissenschaft
    Other subjects: Hardcover, Softcover / Biologie
    Scope: x, 152 Seiten, 297 mm
    Notes:

    From the content: The Deadly Beauty of Cancer.- Cellular Connections.- Annealing Party.- Cells on the Ferris Wheel.- The Magic Pants that Always Fit.- Racing Triangles.- Rising Dragons.- Henri in Wonderland.- Peak of the Iceberg.- Guiding Spiral.- The Hidden Beauty of Roots.- The Beauty of a Beast.- The Ghost.- Lymph Node Landscapes.- Breezing Drops.- Labyrinths: Exotic Patterns of Cortical Activity.- Mammalian Lipidomic Network.- One Step at a Time.- How a Tumor Gets its Spots.- Patchwork Patterns.- Cancer Warfare.- Collective Decision Making.- Cell Simulation in Blossom.- Semblance of Heterogeneity.- Can we Crack Cancer?.- Dance with Predators and Prey.- Knitting Proteins.- Nothing Stands Still in the Streams of Life.- Restless Mind Wandering.- Morphological Echoes.- Cancer as a Killer Tsunami.- Cells Are Watching You.- Roots or Flowers? Take a Guess.- Spectral Forms and Cosmic Storms.- Antigenic Explosion.- Crop Circles of Cancer.- Scalp.- Coupled Invasion.- Lost in the Cells.- Becoming Important.- Community Matters.- Acidic Dance.- Flocking, Swirling and Spinning Stars in a Cell.- A Mosaic of Cancer and Liver Tissue.- Cell Firework.- Pulled in Line.- Convergence.- Arctic Breeze.- Extracellular Galaxies.- Oriental Landscape Painting byPredator Species.- Life is Lived on the Edge.- Cellular Swarms in Cellular Automata.- Bumps, Ridges, and no Flows in Vein.- Growing Orbs /Mingled Metabolism.- Out of the Comfort Zone.- Green Protein Interaction Wheel.- Vincent van Gogh’s Autocatalysis.- Clonal Inferno.- What Lies Beneath (the Heartbeat).- Tree of Life.- Tower of Life.- Clone Wars - The Immune System Awakens.- Modelled Cell.- CD196-.- Tumor Composition Depends on the Viewing Angle.- Poincaré’s Homoclinic Horror.- E A S (Evolving Asteroid Starships).- Interacting Spider Webs.- Heart Cells areaMAZEing.- Actin Spring.- Dynamical Diggers.-
  9. The Art of Theoretical Biology
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020]
    Publisher:  Springer, Cham

    This beautifully crafted book collects images, which were created during the process of research in all fields of theoretical biology. Data analysis, numerical treatment of a model, or simulation results yield stunning images, which represent pieces... more

    Location:
    Humboldt-Universität zu Berlin, Universitätsbibliothek, Jacob-und-Wilhelm-Grimm-Zentrum
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    This beautifully crafted book collects images, which were created during the process of research in all fields of theoretical biology. Data analysis, numerical treatment of a model, or simulation results yield stunning images, which represent pieces of art just by themselves. The approach of the book is to present for each piece of visualization a lucid synopsis of the scientific background as well as an outline of the artistic vision

     
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    Source: Union catalogues
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Book
    ISBN: 9783030334703
    RVK Categories: WB 4185 ; WD 9000
    Subjects: bicssc; bicssc; bicssc; bisacsh; bisacsh; bisacsh; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Life sciences; Theoretische Biologie; Visualisierung; Schönheit; Bildwissenschaft
    Other subjects: Hardcover, Softcover / Biologie
    Scope: x, 152 Seiten, 297 mm
    Notes:

    From the content: The Deadly Beauty of Cancer.- Cellular Connections.- Annealing Party.- Cells on the Ferris Wheel.- The Magic Pants that Always Fit.- Racing Triangles.- Rising Dragons.- Henri in Wonderland.- Peak of the Iceberg.- Guiding Spiral.- The Hidden Beauty of Roots.- The Beauty of a Beast.- The Ghost.- Lymph Node Landscapes.- Breezing Drops.- Labyrinths: Exotic Patterns of Cortical Activity.- Mammalian Lipidomic Network.- One Step at a Time.- How a Tumor Gets its Spots.- Patchwork Patterns.- Cancer Warfare.- Collective Decision Making.- Cell Simulation in Blossom.- Semblance of Heterogeneity.- Can we Crack Cancer?.- Dance with Predators and Prey.- Knitting Proteins.- Nothing Stands Still in the Streams of Life.- Restless Mind Wandering.- Morphological Echoes.- Cancer as a Killer Tsunami.- Cells Are Watching You.- Roots or Flowers? Take a Guess.- Spectral Forms and Cosmic Storms.- Antigenic Explosion.- Crop Circles of Cancer.- Scalp.- Coupled Invasion.- Lost in the Cells.- Becoming Important.- Community Matters.- Acidic Dance.- Flocking, Swirling and Spinning Stars in a Cell.- A Mosaic of Cancer and Liver Tissue.- Cell Firework.- Pulled in Line.- Convergence.- Arctic Breeze.- Extracellular Galaxies.- Oriental Landscape Painting byPredator Species.- Life is Lived on the Edge.- Cellular Swarms in Cellular Automata.- Bumps, Ridges, and no Flows in Vein.- Growing Orbs /Mingled Metabolism.- Out of the Comfort Zone.- Green Protein Interaction Wheel.- Vincent van Gogh’s Autocatalysis.- Clonal Inferno.- What Lies Beneath (the Heartbeat).- Tree of Life.- Tower of Life.- Clone Wars - The Immune System Awakens.- Modelled Cell.- CD196-.- Tumor Composition Depends on the Viewing Angle.- Poincaré’s Homoclinic Horror.- E A S (Evolving Asteroid Starships).- Interacting Spider Webs.- Heart Cells areaMAZEing.- Actin Spring.- Dynamical Diggers.-
  10. Knowledge discovery in life science literature
    PAKDD 2006 international workshop, KDLL 2006, Singapore, April 9, 2006 ; proceedings
    Contributor: Bremer, Eric G. (Publisher)
    Published: 2006
    Publisher:  Springer, Berlin [u.a.]

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    Source: Union catalogues
    Contributor: Bremer, Eric G. (Publisher)
    Language: English
    Media type: Book
    Format: Print
    ISBN: 3540328092; 9783540328094
    Other identifier:
    9783540328094
    RVK Categories: SS 4800
    DDC Categories: 570
    Series: Lecture notes in computer science ; 3886 : Lecture notes in bioinformatics
    Subjects: Life sciences; Data mining; Computer science; Database management; Information storage and retrieval systems; Artificial intelligence; Bioinformatics; Medical records
    Scope: XIV, 145 S., Ill., graph. Darst.
    Notes:

    Literaturangaben
  11. Medizininformatik
    Ein Kompendium für Studium und Praxis
    Author: Dugas, Martin
    Published: 2017
    Publisher:  Springer Berlin Heidelberg, Berlin, Heidelberg ; Springer International Publishing AG, Cham

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    Source: Union catalogues
    Language: German
    Media type: Ebook
    Format: Online
    ISBN: 9783662533284; 3662533286
    Other identifier:
    DDC Categories: 610
    Edition: 1st ed. 2017
    Subjects: Medizinische Informatik; Medical informatics; Bioinformatics; Digital humanities; Health Informatics; Computational and Systems Biology; Digital Humanities
    Scope: 1 Online-Ressource (X, 259 Seiten), 160 Abb., 113 Abb. in Farbe.
  12. Knowledge Discovery in Life Science Literature
    International Workshop, KDLL 2006, Singapore, April 9, 2006, Proceedings
    Contributor: Bremer, Eric G (Herausgeber); Hakenberg, Jörg (Herausgeber); Han, Eui-Hong Sam (Herausgeber); Berrar, Daniel (Herausgeber); Dubitzky, Werner (Herausgeber)
    Published: 2006
    Publisher:  Springer Berlin Heidelberg, Berlin, Heidelberg ; Springer International Publishing AG, Cham

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    TU Darmstadt, Universitäts- und Landesbibliothek - Stadtmitte
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    Source: Union catalogues
    Contributor: Bremer, Eric G (Herausgeber); Hakenberg, Jörg (Herausgeber); Han, Eui-Hong Sam (Herausgeber); Berrar, Daniel (Herausgeber); Dubitzky, Werner (Herausgeber)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9783540328100; 3540328106; 3540328092; 3540821457
    Other identifier:
    RVK Categories: SS 4800
    DDC Categories: 570
    Edition: 1st edition 2006
    Series: Lecture Notes in Bioinformatics ; 3886
    Subjects: Biowissenschaften; Wissenschaftliche Literatur; Wissensextraktion; Database management; Artificial intelligence; Information storage and retrieval systems; Bioinformatics; Computer science; Mathematical statistics; Medical informatics; Database Management; Artificial Intelligence; Information Storage and Retrieval; Bioinformatics; Probability and Statistics in Computer Science; Health Informatics
    Scope: 1 Online-Ressource (XIV, 147 Seiten)
  13. Complex Sciences
    First International Conference, Complex 2009, Shanghai, China, February 23-25, 2009. Revised Selected Papers
    Contributor: Zhou, Jie (Herausgeber)
    Published: 2009
    Publisher:  Springer Berlin Heidelberg, Berlin, Heidelberg ; Springer International Publishing AG, Cham

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    Source: Union catalogues
    Contributor: Zhou, Jie (Herausgeber)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9783642024665; 3642024661
    Other identifier:
    Edition: 1st ed. 2009
    Series: Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering ; 4
    Subjects: Social sciences; Digital humanities; Computer-aided engineering; Bioinformatics; Computers and civilization; Economics; Computer Application in Social and Behavioral Sciences; Digital Humanities; Computer-Aided Engineering (CAD, CAE) and Design; Computational and Systems Biology; Computers and Society; Political Economy and Economic Systems
    Scope: 1 Online-Ressource (LXII, 1191 Seiten)
  14. Grammars for Language and Genes
    Theoretical and Empirical Investigations
    Author: Chiang, David
    Published: 2012
    Publisher:  Springer Berlin Heidelberg, Berlin, Heidelberg ; Springer International Publishing AG, Cham

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    Language: English
    Media type: Ebook
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    ISBN: 9783642204449; 3642204449
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    DDC Categories: 400; 570; 004
    Edition: 1st ed. 2012
    Series: Theory and Applications of Natural Language Processing
    Subjects: Formale Grammatik; Generative Kapazität; Syntaktische Analyse; Maschinelle Übersetzung; Natürliche Sprache; Sequenzdaten; Nucleotidsequenz; Aminosäurensequenz; Machine theory; Natural language processing (Computer science); Bioinformatics; Formal Languages and Automata Theory; Natural Language Processing (NLP); Computational and Systems Biology
    Scope: 1 Online-Ressource (XII, 120 Seiten)
  15. Stochastic Process Models on Dynamic Networks
    Author: Bu, Fan
    Published: 2021

    We present novel model frameworks and inference procedures for stochastic point processes on dynamic networks. The point process can be defined for a random phenomenon that spreads among the network nodes, and for the temporally evolving network... more

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    We present novel model frameworks and inference procedures for stochastic point processes on dynamic networks. The point process can be defined for a random phenomenon that spreads among the network nodes, and for the temporally evolving network itself. Methods development is motivated by the needs of health and social science data, where partial observations or latent structures are common and create challenges to likelihood-based inference. In this dissertation, we will discuss parameter estimation techniques that can handle these latent variables and make effective use of the complete data likelihood for efficient inference. We start with developing individualized continuous time Markov chain models for stochastic epidemics on a dynamic contact network. Data-augmentation algorithms are designed to address partial observations (such as missing infection and recovery times) in epidemic data while accommodating the network dynamics. We apply the frameworks to the study of non-pharmaceutical interventions in a college population. Next, we move on to study the higher-order latent structures of dynamic inter-personal interactions by combining a multi-resolution spatio-temporal stochastic process with a latent factor model for a dynamic social network. We apply it to analyzing basketball data where the discovered latent structure defines a metric that helps evaluate the quality of game play. Finally, we discuss extensions to a non-Markovian setting of self and mutually exciting point processes (Hawkes processes). We utilize the branching structure of the Hawkes processes to uncover the latent replying structure of a group conversation, which can be further employed to quantitatively measure individual social impact.

     
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    Language: English
    Media type: Dissertation
    Format: Online
    ISBN: 9798460431137
    Series: Dissertations Abstracts International
    Subjects: Statistics; Rhetoric; Sports management; Bioinformatics; Epidemiology; Social media; Social networks; Sports analytics; Stochastic epidemic models; Stochastic processes
    Scope: 1 Online-Ressource (183 p.)
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    Source: Dissertations Abstracts International, Volume: 83-04, Section: B. - Advisor: Volfovsky, Alexander

    Dissertation (Ph.D.), Duke University, 2021
  16. The Art of Theoretical Biology /
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020].; ©2020.
    Publisher:  Springer International Publishing,, Cham :

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    Source: Philologische Bibliothek, FU Berlin
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 978-3-030-33471-0
    Other identifier:
    RVK Categories: WB 4185 ; WD 9000
    Subjects: Systems Biology; Visualization; Fine Arts; Computational Biology/Bioinformatics; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Theoretische Biologie; Bildwissenschaft; Visualisierung; Schönheit
    Scope: 1 Online-Ressource (X, 152 Seiten) :, Illustrationen.
  17. The Art of Theoretical Biology /
    Contributor: Matthäus, Franziska, (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas, (Publisher)
    Published: [2020].; ©2020.
    Publisher:  Springer International Publishing,, Cham :

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    Humboldt-Universität zu Berlin, Universitätsbibliothek, Jacob-und-Wilhelm-Grimm-Zentrum
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    Contributor: Matthäus, Franziska, (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas, (Publisher)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 978-3-030-33471-0
    Other identifier:
    RVK Categories: WB 4185 ; WD 9000
    Subjects: Systems Biology; Visualization; Fine Arts; Computational Biology/Bioinformatics; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Theoretische Biologie.; Bildwissenschaft.; Visualisierung.; Schönheit.
    Scope: 1 Online-Ressource (X, 152 Seiten) :, Illustrationen.
  18. The Art of Theoretical Biology /
    Contributor: Matthäus, Franziska, (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas, (Publisher)
    Published: [2020].
    Publisher:  Springer,, Cham :

    This beautifully crafted book collects images, which were created during the process of research in all fields of theoretical biology. Data analysis, numerical treatment of a model, or simulation results yield stunning images, which represent pieces... more

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    This beautifully crafted book collects images, which were created during the process of research in all fields of theoretical biology. Data analysis, numerical treatment of a model, or simulation results yield stunning images, which represent pieces of art just by themselves. The approach of the book is to present for each piece of visualization a lucid synopsis of the scientific background as well as an outline of the artistic vision

     
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    Source: Union catalogues
    Contributor: Matthäus, Franziska, (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas, (Publisher)
    Language: English
    Media type: Book
    Format: Print
    ISBN: 978-3-030-33470-3
    RVK Categories: WB 4185 ; WD 9000
    Subjects: bicssc; bisacsh; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Life sciences; Theoretische Biologie.; Bildwissenschaft.; Visualisierung.; Schönheit.
    Other subjects: Hardcover, Softcover / Biologie
    Scope: x, 152 Seiten ;, 297 mm.
    Notes:

    From the content: The Deadly Beauty of Cancer.- Cellular Connections.- Annealing Party.- Cells on the Ferris Wheel.- The Magic Pants that Always Fit.- Racing Triangles.- Rising Dragons.- Henri in Wonderland.- Peak of the Iceberg.- Guiding Spiral.- The Hidden Beauty of Roots.- The Beauty of a Beast.- The Ghost.- Lymph Node Landscapes.- Breezing Drops.- Labyrinths: Exotic Patterns of Cortical Activity.- Mammalian Lipidomic Network.- One Step at a Time.- How a Tumor Gets its Spots.- Patchwork Patterns.- Cancer Warfare.- Collective Decision Making.- Cell Simulation in Blossom.- Semblance of Heterogeneity.- Can we Crack Cancer?.- Dance with Predators and Prey.- Knitting Proteins.- Nothing Stands Still in the Streams of Life.- Restless Mind Wandering.- Morphological Echoes.- Cancer as a Killer Tsunami.- Cells Are Watching You.- Roots or Flowers? Take a Guess.- Spectral Forms and Cosmic Storms.- Antigenic Explosion.- Crop Circles of Cancer.- Scalp.- Coupled Invasion.- Lost in the Cells.- Becoming Important.- Community Matters.- Acidic Dance.- Flocking, Swirling and Spinning Stars in a Cell.- A Mosaic of Cancer and Liver Tissue.- Cell Firework.- Pulled in Line.- Convergence.- Arctic Breeze.- Extracellular Galaxies.- Oriental Landscape Painting byPredator Species.- Life is Lived on the Edge.- Cellular Swarms in Cellular Automata.- Bumps, Ridges, and no Flows in Vein.- Growing Orbs /Mingled Metabolism.- Out of the Comfort Zone.- Green Protein Interaction Wheel.- Vincent van Gogh’s Autocatalysis.- Clonal Inferno.- What Lies Beneath (the Heartbeat).- Tree of Life.- Tower of Life.- Clone Wars - The Immune System Awakens.- Modelled Cell.- CD196-.- Tumor Composition Depends on the Viewing Angle.- Poincaré’s Homoclinic Horror.- E A S (Evolving Asteroid Starships).- Interacting Spider Webs.- Heart Cells areaMAZEing.- Actin Spring.- Dynamical Diggers.-
  19. The Art of Theoretical Biology
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020]; ©2020
    Publisher:  Springer International Publishing, Cham

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    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9783030334710
    Other identifier:
    RVK Categories: WB 4185 ; WD 9000
    Subjects: Systems Biology; Visualization; Fine Arts; Computational Biology/Bioinformatics; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Theoretische Biologie; Visualisierung; Schönheit; Bildwissenschaft
    Scope: 1 Online-Ressource (X, 152 Seiten), Illustrationen
  20. The Art of Theoretical Biology /
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Published: [2020].; ©2020.
    Publisher:  Springer International Publishing,, Cham :

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    Source: Union catalogues
    Contributor: Matthäus, Franziska (Publisher); Matthäus, Sebastian (Publisher); Harris, Sarah (Publisher); Hillen, Thomas (Publisher)
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 978-3-030-33471-0
    Other identifier:
    RVK Categories: WB 4185 ; WD 9000
    Subjects: Systems Biology; Visualization; Fine Arts; Computational Biology/Bioinformatics; Systems biology; Mathematics; Visualization; Fine arts; Bioinformatics; Theoretische Biologie; Bildwissenschaft; Visualisierung; Schönheit
    Scope: 1 Online-Ressource (X, 152 Seiten) :, Illustrationen.
  21. Knowledge Discovery in Life Science Literature
    International Workshop, KDLL 2006, Singapore, April 9, 2006, Proceedings
    Published: 2006
    Publisher:  Springer Berlin Heidelberg, Berlin, Heidelberg

    Alignment of Biomedical Ontologies Using Life Science Literature -- Improving Literature Preselection by Searching for Images -- Headwords and Suffixes in Biomedical Names -- A Tree Kernel-Based Method for Protein-Protein Interaction Mining from... more

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    Alignment of Biomedical Ontologies Using Life Science Literature -- Improving Literature Preselection by Searching for Images -- Headwords and Suffixes in Biomedical Names -- A Tree Kernel-Based Method for Protein-Protein Interaction Mining from Biomedical Literature -- Recognizing Biomedical Named Entities Using SVMs: Improving Recognition Performance with a Minimal Set of Features -- Investigation of the Changes of Temporal Topic Profiles in Biomedical Literature -- Extracting Protein-Protein Interactions in Biomedical Literature Using an Existing Syntactic Parser -- Extracting Named Entities Using Support Vector Machines -- Extracting Initial and Reliable Negative Documents to Enhance Classification Performance -- Detecting Invalid Dictionary Entries for Biomedical Text Mining -- Automated Identification of Protein Classification and Detection of Annotation Errors in Protein Databases Using Statistical Approaches -- GetItFull – A Tool for Downloading and Pre-processing Full-Text Journal Articles.

     
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    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9783540328100
    Other identifier:
    RVK Categories: SS 4800
    Series: Lecture Notes in Computer Science ; 3886
    Array
    Subjects: Medical records; Computer Science; Data mining; Life sciences; Computer science; Database management; Information storage and retrieval systems; Artificial intelligence; Bioinformatics; Medical records; Computer science; Database management; Information storage and retrieval systems; Artificial intelligence; Bioinformatics; Mathematical statistics.; Medical informatics.
    Scope: Online-Ressource (XIV, 147 p. Also available online, digital)
    Notes:

    Lizenzpflichtig
  22. Unravelling the Soil Microbiome
    Perspectives For Environmental Sustainability
    Author: Dubey, Rama Kant; Tripathi, Vishal; Prabha, Ratna; Chaurasia, Rajan; Singh, Dhananjaya Pratap; Rao, Ch. Srinivasa; El-Keblawy, Ali; Abhilash, Purushothaman Chirakkuzhyil
    Published: 2020
    Publisher:  Springer, Cham

    Chapter1: Introduction -- Chapter2: Belowground microbial communities: A key players for soil and environmental Sustainability -- Chapter3: Methods for exploring soil microbial diversity -- Chapter4: Genomics based methods for microbial diversity... more

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    Chapter1: Introduction -- Chapter2: Belowground microbial communities: A key players for soil and environmental Sustainability -- Chapter3: Methods for exploring soil microbial diversity -- Chapter4: Genomics based methods for microbial diversity analysis from soils.-Chapter5: Metaproteomics and metatranscriptomics for microbial communities profiling -- Chapter6: Bioinformatics tools for soil microbial community analysis -- Chapter7: Conclusion and future perspectives This book explores the significance of soil microbial diversity to understand its utility in soil functions, ecosystem services, environmental sustainability, and achieving the sustainable development goals. With a focus on agriculture and environment, the book highlights the importance of the microbial world by providing state-of-the-art technologies for examining the structural and functional attributes of soil microbial diversity for applications in healthcare, industrial biotechnology, and bioremediation studies. In seven chapters, the book will act as a primer for students, environmental biotechnologists, microbial ecologists, plant scientists, and agricultural microbiologists. Chapter 1 introduces readers to the soil microbiome, and chapter 2 discusses the below ground microbial world. Chapter 3 addresses various methods for exploring microbial diversity, chapter 4 discusses the genomics methods, chapter 5 provides the metaproteomics and metatranscriptomics approaches and chapter 6 details the bioinformatics tools for soil microbial community analysis, and chapter 7 concludes the text with future perspectives on further soil microbial uses and applications

     
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    ISBN: 9783030155162
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    Series: SpringerBriefs in Environmental Science
    Springer eBook Collection
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    Subjects: Soil Science & Conservation; Soil conservation; Microbiology; Agriculture; Bioinformatics; Soil science.
    Scope: 1 Online-Ressource (XVII, 104 p. 12 illus. in color)
  23. Grammars for Language and Genes
    Theoretical and Empirical Investigations
    Author: Chiang, David
    Published: 2012
    Publisher:  Springer-Verlag Berlin Heidelberg, Berlin, Heidelberg

    1.Introduction -- 2.Foundation -- 3.Statistical Parsing -- 4.Machine Translation -- 5.Biological Sequence Analysis: Basics -- 6.Biological Sequence Analysis: Intersection -- 7.Conclusion -- References -- Index Grammars are gaining importance in... more

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    1.Introduction -- 2.Foundation -- 3.Statistical Parsing -- 4.Machine Translation -- 5.Biological Sequence Analysis: Basics -- 6.Biological Sequence Analysis: Intersection -- 7.Conclusion -- References -- Index Grammars are gaining importance in natural language processing and computational biology as a means of encoding theories and structuring algorithms. But one serious obstacle to applications of grammars is that formal language theory traditionally classifies grammars according to their weak generative capacity (what sets of strings they generate) and tends to ignore strong generative capacity (what sets of structural descriptions they generate) even though the latter is more relevant to applications. This book develops and demonstrates a framework for carrying out rigorous comparisons of grammar formalisms in terms of their usefulness for applications, focusing on three areas of application: statistical parsing, natural language translation, and biological sequence analysis. These results should pave the way for theoretical research to pursue results that are more directed towards applications, and for practical research to explore the use of advanced grammar formalisms more easily

     
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    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9783642204449; 1283449471; 9781283449472
    Other identifier:
    Series: Theory and Applications of Natural Language Processing
    Array
    Subjects: Computer Science; Computer science; Translators (Computer programs); Bioinformatics; Computer science; Translators (Computer programs); Bioinformatics
    Scope: Online-Ressource (XII, 120p. 67 illus, digital)
    Notes:

    Includes bibliographical references and index

    Grammars for Language and Genes; Foreword; Acknowledgements; Contents; Chapter 1 Introduction; 1.1 The Problem of Strong Generative Capacity; 1.2 Wine, King,Woman, and Truth; 1.3 The Case of Dutch Cross-Serial Dependencies; 1.4 Overview; Theoretical framework; Statistical parsing; Machine translation; Biological sequence analysis; Chapter 2 Foundation; 2.1 Strong Generative Capacity, Relativized; 2.2 Simple Literal Movement Grammars; 2.3 Interpretation Functions; 2.4 Summary; 2.5 Additional Topics; 2.5.1 Tree-Adjoining Grammars; No adjunction: tree substitution grammars

    No wrapping adjunction: tree-insertion grammarsLimited spine adjunction: regular form; Multiple adjunction and sister adjunction; 2.5.2 Multicomponent Grammars; 2.5.3 Parsing; 2.5.4 Cover Grammars; Chapter 3 Statistical Parsing; 3.1 Measuring Statistical Modeling Power; 3.2 Lexicalized Probabilistic CFG; 3.3 A Probabilistic TIG Model; Basic definition; Independence assumptions and smoothing; Parsing; 3.4 Training from Partial Structural Descriptions; 3.4.1 Rule-Based Reconstruction; 3.4.2 Training by Expectation-Maximization; 3.5 Related Work; 3.6 Summary; Chapter 4 Machine Translation

    4.1 Measuring Translation Power4.2 Translation and Bitext Parsing; 4.3 Synchronous CFG; 4.3.1 Applications to Translation; Inversion transduction grammar; Yamada-Knight syntax-based model; Hiero; 4.3.2 Extensions Synchronous TSG; Synchronous tree sequence substitution grammar; Synchronous TIG; 4.4 Synchronous TAG; 4.4.1 Synchronous Regular Form TAG; 4.4.2 Extensions; Bounded nonisomorphisms: TAG.TSG; A more substantial extension: TAG.RF-TAG; 4.5 Summary; Chapter 5 Biological Sequence Analysis: Basics; 5.1 Background; 5.1.1 Sequences; 5.1.2 Structures; 5.2 Measuring Sequence Analysis Power

    5.3 Linked Grammars for Sequence Analysis5.3.1 Squeezing DGC; Alpha-helices; Limited RNA tertiary interactions; 5.3.2 Beyond CFG; Pseudoknots; Beta-sheets; 5.4 Computing Probabilities and Partition Functions; Calculating energies; Counting conformations; Computing partial sums of the partition function; Implementation details; 5.5 Summary; Chapter 6 Biological Sequence Analysis: Intersection; 6.1 Intersecting CFLs and CFLs: a Critique; 6.2 Intersecting CFGs and Finite-State Automata; 6.2.1 Integrating the Zimm-Bragg Model and the HP Model; 6.2.2 Intersecting the Grammars

    6.2.3 Computing the Partition Function6.2.4 Evaluation Against Exact Enumeration; 6.3 Intersection in Nonlinear sLMGs; 6.4 Summary; Chapter 7 Conclusion; Statistical parsing; Machine translation; Biological sequence analysis; Conclusion; References; Index;
  24. Natural Computing and Beyond
    Winter School Hakodate 2011, Hakodate, Japan, March 2011 and 6th International Workshop on Natural Computing, Tokyo, Japan, March 2012, Proceedings
    Author: Suzuki, Yasuhiro
    Published: 2013
    Publisher:  Springer, Tokyo

    Natural Computing -- Ethological response to periodic stimulation in Chara and Brepharisma -- Adaptive path-finding and transport network formation by the amoeba-like organism Physarum -- Aggregate "Calculation" in Economic Phenomena: Distributions... more

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    Natural Computing -- Ethological response to periodic stimulation in Chara and Brepharisma -- Adaptive path-finding and transport network formation by the amoeba-like organism Physarum -- Aggregate "Calculation" in Economic Phenomena: Distributions and Fluctuations -- Towards Co-evolution of Information, Life and Artifcial Life -- Harness the Nature for Computation -- Things Theory of Art Should Learn From Natural Computing -- Study on the use of Evolutionary Techniques for inference in Gene Regulatory Networks -- Reconstruction of Gene Regulatory Networks from Gene Expression Data using Decoupled Recurrent Neural Network Model -- Design and control of synthetic biological systems -- Satellite Symposium on Computational Aesthetics -- Preface-Natural Computing and Computational Aesthetics -- The Significance of Natural Computing for Considering Computational Aesthetics of Nature -- Perceiving the Gap: asynchronous coordination of plural algorithms and disconnected logical types in ambient space -- Aesthetic Aspects of Technology-mediated Self-awareness Experiences This book contains the joint proceedings of the Winter School of Hakodate (WSH) 2011 held in Hakodate, Japan, March 15-16, 2011, and the 6th International Workshop on Natural Computing (6th IWNC) held in Tokyo, Japan, March 28-30, 2012, organized by the Special Interest Group of Natural Computing (SIG-NAC), the Japanese Society for Artificial Intelligence (JSAI). This volume compiles refereed contributions to various aspects of natural computing, ranging from computing with slime mold, artificial chemistry, eco-physics, and synthetic biology, to computational aesthetics.

     
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    Volltext (kostenfrei)
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    Source: Union catalogues
    Language: English
    Media type: Ebook
    Format: Online
    ISBN: 9784431543947
    Other identifier:
    RVK Categories: SS 2011 ; SS 2012
    Series: Proceedings in Information and Communications Technology ; 6
    Array
    Subjects: Humanities; Information systems; Computers.; Application software.; Computer science; Computer science; Computer simulation; Information systems; Bioinformatics; Humanities; Computer Science; Computer simulation; Bioinformatics; Digital humanities.; Computer Systems
    Scope: Online-Ressource (XII, 155 p. 64 illus, digital)
    Notes:

    Includes bibliographical references and index

    Cover; Title; Preface; Organization; Table of Contents; Part I Natural Computing; Ethological Response to Periodic Stimulation in Chara and Blepharisma; Introduction; Method; Organism and Culture; Observation of Swimming Behavior in Response to Periodic Stimulation in Blepharisma; Measurement for Slowdown in Protoplasmic Flow, Induced by Periodic Stimulation in Chara; Results; Spontaneous Increases of Swimming Measure at an Anticipatory and a Recalling Occasions in Blepharisma; Spontaneous Slowdown of Protoplasmic Flow at an Anticipatory Occasions in Chara; Discussion; References

    Adaptive Path-Finding and Transport Network Formation by the Amoeba-Like Organism PhysarumIntroduction; Material and Methods; Preparation of Organism and Maze; Comparison of Network Structure between Real Transport Networks in the Hokkaido Region, Japan, and Physarum Networks Connecting FSs; Results; Solving a Maze with the Topological Type in Fig. 1a.; Solving a Maze with Topological Type in Fig. 1c; Transport Network in Hokkaido; Path-Finding and Multi-functionally Networking Derived by Morphogenetic Dynamics of Vein; Model Simulation; Discussion; References

    Aggregate "Calculation" in Economic Phenomena: Distributions and FluctuationsIntroduction; Distributions; Fluctuations; Distributions of Growth-Rates; Relations among the Laws; Summary; References; Towards Co-evolution of Information, Life and Artificial Life; Introduction; Spectrum of Wet Artificial Life; Molecular Robotics; Synthetic Biology; Evolution and Self-organization of Information; Amplification of Human Intelligence; Automatic Design by Artificial Intelligence; Cloud; Future of Molecular Robots; Connecting Chemical-Biological and Electronic Systems; Dream; References

    Harness the Nature for ComputationIntroduction; Abstract Rewriting System on Multisets, ARMS; Simulation of Natural Systems; Modeling Ecological System; Dissipation of Information; Harness the Nature for Computation; Conclusion; References; Things Theory of Art Should Learn from Natural Computing; Introduction; Critical Artworks; Critical Artworks Irritate Me; Where Are the Fine Arts?; A Short History of Arts; Traditional Distribution of Arts; Reorganization of the Distribution in the 18th Century: Machine Arts and Fine Arts; Fine Arts as the Intersection of Nature and Arts

    Summary of This ChapterImportant Note (1); "Art" Deviates from Fine Arts; What and How Should We Evaluate? Lessons from Natural Computing; The Idea that Computation and Algorithm Caused the Total Reorganization of Arts; The Idea of 'Harness' in Natural Computing Imitates Nature in Its Complexity; Important Note (2); Other Key Points; What Should We Evaluate?; Concluding Remarks: What Theory of Art Could Learn from Natural Computing; References; Study on the Use of Evolutionary Techniques for Inference in Gene Regulatory Networks; Introduction; Related Work; GRN Modeling

    S-System as a Model for Biological Networks

    Natural Computing -- Ethological response to periodic stimulation in Chara and Brepharisma -- Adaptive path-finding and transport network formation by the amoeba-like organism Physarum -- Aggregate "Calculation" in Economic Phenomena: Distributions and Fluctuations -- Towards Co-evolution of Information, Life and Artifcial Life -- Harness the Nature for Computation -- Things Theory of Art Should Learn From Natural Computing -- Study on the use of Evolutionary Techniques for inference in Gene Regulatory Networks -- Reconstruction of Gene Regulatory Networks from Gene Expression Data using Decoupled Recurrent Neural Network Model -- Design and control of synthetic biological systems -- Satellite Symposium on Computational Aesthetics -- Preface-Natural Computing and Computational Aesthetics -- The Significance of Natural Computing for Considering Computational Aesthetics of Nature -- Perceiving the Gap: asynchronous coordination of plural algorithms and disconnected logical types in ambient space -- Aesthetic Aspects of Technology-mediated Self-awareness Experiences.
  25. Advancing computational biology and bioinformatics research through open innovation competitions
    Author: Blasco, Andrea; Endres, Michael G.; Sergeev, Rinat A.; Jonchhe, Anup; Macaluso, Max; Narayan, Rajiv; Natoli, Ted; Paik, Jin H.; Briney, Bryan; Wu, Chunlei; Su, Andrew I.; Subramanian, Aravind; Lakhani, Karim R.
    Published: [2019]
    Publisher:  Harvard Business School, [Boston, MA]

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    Language: English
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    Format: Online
    Series: Working paper / Harvard Business School ; 19, 097
    Subjects: Computational biology; Bioinformatics; Innovation competitions; Research; Mathematical Methods; Strategy
    Scope: 1 Online-Ressource (circa 36 Seiten), Illustrationen